BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E08SP1|AL430717
(942 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1827 0.0
>3x_Contig1672
Length = 13609
Score = 1827 bits (917), Expect = 0.0
Identities = 930/937 (99%), Gaps = 1/937 (0%)
Strand = Plus / Plus
Query: 1 gatctgccaaataattcgaagagtcgatggaatgcacgccaatgtcttcttgatcatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gatctgccaaataattcgaagagtcgatggaatgcacgccaatgtcttcttgatcatcag 314
Query: 61 cgatcatattcttctcttgaagctcacgctcagtaaatgtgtgataataatcgatttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cgatcatattcttctcttgaagctcacgctcagtaaatgtgtgataataatcgatttggt 374
Query: 121 cagtttcaccaactgtaggcttgaaaatagtgttaatgatatagtaaagggcgaaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cagtttcaccaactgtaggcttgaaaatagtgttaatgatatagtaaagggcgaaggtaa 434
Query: 181 cggcgaattggaaaatgaacgaaccttggaagaagtgttcaatacctgtattgataggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cggcgaattggaaaatgaacgaaccttggaagaagtgttcaatacctgtattgataggaa 494
Query: 241 tgtttgggttagccgcattgatcaaaccaggcaaacccggggccgcaccacataagaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgtttgggttagccgcattgatcaaaccaggcaaacccggggccgcaccacataagaaac 554
Query: 301 aaaggatgttcttccagttaataccgtactgaaaccagtaaattgaggaaggagaatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaaggatgttcttccagttaataccgtactgaaaccagtaaattgaggaaggagaatcat 614
Query: 361 cgtaacagtcggataacttgataacgccctttctaatgacaaaatagtcacaaacaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgtaacagtcggataacttgataacgccctttctaatgacaaaatagtcacaaacaaaca 674
Query: 421 ttgcagttaatggtgtgatgaaaacagtgaacgaagacataactgtgaggaaagtggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttgcagttaatggtgtgatgaaaacagtgaacgaagacataactgtgaggaaagtggaag 734
Query: 481 tagcattatagaataaccatggttgagtaggccaagccaacaacatgatcaatattgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tagcattatagaataaccatggttgagtaggccaagccaacaacatgatcaatattgaac 794
Query: 541 ctcttctgatgttaatgtaacgtgggaagatagaagccaaatccatgccaccagagattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ctcttctgatgttaatgtaacgtgggaagatagaagccaaatccatgccaccagagattg 854
Query: 601 cattactgatacagttgacaccaagctgagaaattagtaaaccgagacctgcaaagaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 cattactgatacagttgacaccaagctgagaaattagtaaaccgagacctgcaaagaagg 914
Query: 661 cagcagctctggacttcggagtataattkagctgcatccaatacatgcagatatcattag 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 915 cagcagctctggacttcggagtataatttagctgcatccaatacatgcagatatcattag 974
Query: 721 gcatccaaaaagactcgccgtatttttctaataaagcagaagcagtwacaatacccatca 780
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 975 gcatccaaaaagactcgccgtatttttctaataaagcagaagcagtaacaatacccatca 1034
Query: 781 aaggaagcacgatacccattacgttgacaccgattaggataccgatgtaagcagatctgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 aaggaagcacgatacccattacgttgacaccgattaggataccgatgtaagcagatctgg 1094
Query: 841 gccttttgttkaaacgagaraaatcggattggkttgarataccagcgataatgaatgaat 900
|||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1095 gccttttgttgaaacgagagaaatcggattggtttgaaataccagcgataatgaatgaat 1154
Query: 901 accaagcattcaagtttgtgatcc-agaccaagcaag 936
|||||||||||||||||||||||| ||||||||||||
Sbjct: 1155 accaagcattcaagtttgtgatccaagaccaagcaag 1191
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6248
Number of Sequences: 1807
Number of extensions: 6248
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)